STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mybl1V-myb avian myeloblastosis viral oncogene homolog-like 1. (737 aa)    
Predicted Functional Partners:
lin37
Lin-37 DREAM MuvB core complex component.
   
 0.798
lin52
Protein lin-52 homolog.
    
 0.783
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.768
lin54
Lin-54 DREAM MuvB core complex component.
    
 0.634
LOC100710529
Protein lin-54 homolog isoform X1.
    
 0.634
LOC100706337
WD_REPEATS_REGION domain-containing protein.
   
 0.617
LOC100711479
Retinoblastoma binding protein 4.
   
 0.617
LOC100695351
Retinoblastoma binding protein 4, like.
   
 0.617
ENSONIP00000021408
High mobility group AT-hook 1a.
   
  
 0.591
cdc73
Ro60, Y RNA binding protein.
      
 0.581
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (26%) [HD]