STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atg7ATG7 autophagy related 7 homolog (S. cerevisiae). (755 aa)    
Predicted Functional Partners:
atg3
Autophagy-related protein 3.
    
 0.999
Atg12
Ubiquitin-like protein ATG12.
    
 0.999
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.996
gabarap
Gamma-aminobutyric acid receptor-associated protein.
   
 0.996
atg5
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 0.995
LOC100697001
Gamma-aminobutyric acid receptor-associated protein-like 1.
   
 0.984
I3JY07_ORENI
GABA(A) receptor-associated protein like 2.
   
 0.963
Birc6
Baculoviral IAP repeat containing 6.
  
 0.962
trip12
Thyroid hormone receptor interactor 12.
    
 0.957
LOC102081483
Ubiquitin-conjugating enzyme E2 variant 1.
   
 
 0.948
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.