STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100705126Zgc:123278. (192 aa)    
Predicted Functional Partners:
vps28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.978
vps37b
Zgc:114173.
   
 0.969
hgs
Hepatocyte growth factor-regulated tyrosine kinase substrate.
    
 0.969
mvb12a
Uncharacterized protein.
    
 0.955
vps37a
VPS37A subunit of ESCRT-I.
   
 0.939
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.935
rps27a
Ribosomal protein S27a.
    
 0.935
ENSONIP00000047919
Ubiquitin B.
    
 0.931
LOC100694595
Multivesicular body subunit 12Bb.
    
 0.911
LOC100697662
Multivesicular body subunit 12Ba.
    
 0.911
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.