STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109194425Uncharacterized protein. (430 aa)    
Predicted Functional Partners:
LOC100696774
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5.
    
 0.905
GALNT5
Polypeptide N-acetylgalactosaminyltransferase.
     
 0.704
LOC100705155
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.
   
 0.703
LOC100700985
Uncharacterized protein.
   
 0.703
LOC100700717
Uncharacterized protein.
   
 0.703
GALNT3
Polypeptide N-acetylgalactosaminyltransferase.
     
 0.702
galnt12
Polypeptide N-acetylgalactosaminyltransferase.
     
 0.699
LOC100695295
Polypeptide N-acetylgalactosaminyltransferase.
     
 0.687
GALNT15
Polypeptide N-acetylgalactosaminyltransferase.
     
 0.686
LOC100705948
Polypeptide N-acetylgalactosaminyltransferase.
     
 0.686
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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