STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lama1Laminin, alpha 1. (2770 aa)    
Predicted Functional Partners:
LOC100706244
Laminin, beta 2 (laminin S).
    
0.680
LOC100707779
Laminin, beta 1a.
    
0.680
lamc1
Laminin, gamma 1.
    
0.558
lamc2
Laminin subunit gamma 2.
    
0.558
LOC102077756
Laminin, gamma 3.
    
0.558
LOC100692535
Integrin beta; Belongs to the integrin beta chain family.
    
 0.550
itgb1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.480
LOC100706507
Laminin, beta 2-like.
    
0.479
I3JAF0_ORENI
Uncharacterized protein.
    
0.479
LOC100690471
Laminin, beta 1b.
    
0.479
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.