STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100705859Kirre like nephrin family adhesion molecule 1b. (819 aa)    
Predicted Functional Partners:
nphs1
NPHS1 adhesion molecule, nephrin.
   
0.930
nck1
Cytoplasmic protein.
    
 0.563
nck2
Cytoplasmic protein.
    
 0.563
LOC100697412
Tyrosine-protein kinase.
    
  0.416
LOC100693162
Tyrosine-protein kinase.
    
  0.416
LOC100693436
Protein-tyrosine kinase 6 isoform X1.
    
  0.416
fyn
Tyrosine-protein kinase.
    
  0.416
I3JNS9_ORENI
Tight junction protein 1b; Belongs to the MAGUK family.
    
 0.408
LOC100698737
Tight junction protein 1a; Belongs to the MAGUK family.
    
 0.408
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.