STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zc3h14Zinc finger CCCH-type containing 14. (664 aa)    
Predicted Functional Partners:
nxf1
Zgc:153681.
    
 
 0.901
msi1
Musashi RNA binding protein 1.
    
 
 0.819
Dazap1
DAZ associated protein 1.
    
 
 0.819
LOC100700987
RNA-binding protein Musashi homolog 1.
    
 
 0.819
I3J0S9_ORENI
Musashi RNA binding protein 2.
    
 
 0.819
ENSONIP00000031680
Nuclear cap-binding protein subunit 2-like.
    
 
 0.789
ENSONIP00000046810
Nuclear cap-binding protein subunit 2-like.
    
 
 0.789
LOC100702413
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
    
 
 0.789
ENSONIP00000075314
annotation not available
    
 
 0.789
tnpo1
Transportin 1.
    
 
 0.788
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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