STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC2A6Solute carrier family 2 member 6; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (499 aa)    
Predicted Functional Partners:
dab2
DAB adaptor protein 2.
   
 
  0.558
LOC100693734
Solute carrier family 38 member 4.
   
 
 0.542
mrps16
Mitochondrial ribosomal protein S16.
   
 
 0.539
Slc27a4
Solute carrier family 27 member 4.
      
 0.537
mrpl46
Mitochondrial ribosomal protein L46.
    
 
 0.536
I3KY89_ORENI
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
   0.535
mrps12
Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
    
 
 0.534
mrpl15
Mitochondrial ribosomal protein L15.
   
   0.534
VAMP3
Vesicle associated membrane protein 3.
   
 
  0.531
mrps15
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
   0.529
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.