STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
robo4Roundabout, axon guidance receptor, homolog 4 (Drosophila). (1048 aa)    
Predicted Functional Partners:
I3JR60_ORENI
Slit homolog 2 (Drosophila).
   
 0.759
I3KPN0_ORENI
Slit homolog 1a (Drosophila).
   
 0.759
LOC100705354
Slit homolog 1b (Drosophila).
   
 0.759
LOC100703331
Slit homolog 3 (Drosophila).
   
 0.749
nyx
Nyctalopin.
   
 0.745
epha7
Eph receptor A7.
    
 0.603
nkd1
NKD inhibitor of WNT signaling pathway 1.
   
  
 0.538
LOC100692560
CDC42 small effector protein 2-A.
      
 0.531
epb41l5
Erythrocyte membrane protein band 4.1 like 5.
      
 0.531
bbs9
Bardet-Biedl syndrome 9.
      
 0.531
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.