STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100694839BCL2 associated athanogene 6, like. (826 aa)    
Predicted Functional Partners:
get4
Guided entry of tail-anchored proteins factor 4.
    
 0.937
ENSONIP00000058229
Large proline-rich protein BAG6 isoform X1.
 
      0.898
LOC100691476
Ubiquitin-like protein 4A.
    
 0.870
ubxn1
UBX domain protein 1.
    
 
 0.852
faf2
Fas associated factor family member 2.
    
 
 0.834
RNF126
Ring finger protein 126.
    
 
 0.737
LOC100696319
Ring finger protein 126.
    
 
 0.737
I3JRJ3_ORENI
Keratin 5; Belongs to the intermediate filament family.
      
 0.700
get3
ATPase get3; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. S [...]
    
 0.691
LOC100699528
Desumoylating isopeptidase 1b.
    
   0.688
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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