Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
I3KGS0_ORENI | I3KHA1_ORENI | ENSONIP00000020315 | ENSONIP00000059266 | REST corepressor 3. | Amine oxidase. | 0.789 |
I3KGS0_ORENI | I3KPA0_ORENI | ENSONIP00000020315 | ENSONIP00000022945 | REST corepressor 3. | PHD finger protein 21Ab. | 0.815 |
I3KGS0_ORENI | KDM1B | ENSONIP00000020315 | ENSONIP00000017413 | REST corepressor 3. | Lysine demethylase 1B. | 0.806 |
I3KGS0_ORENI | Kdm1a | ENSONIP00000020315 | ENSONIP00000048588 | REST corepressor 3. | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | 0.959 |
I3KGS0_ORENI | LOC100691799 | ENSONIP00000020315 | ENSONIP00000009730 | REST corepressor 3. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.688 |
I3KGS0_ORENI | LOC100706625 | ENSONIP00000020315 | ENSONIP00000034791 | REST corepressor 3. | Amine oxidase. | 0.789 |
I3KGS0_ORENI | LOC100711924 | ENSONIP00000020315 | ENSONIP00000010308 | REST corepressor 3. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.688 |
I3KGS0_ORENI | hmg20a | ENSONIP00000020315 | ENSONIP00000040356 | REST corepressor 3. | High mobility group 20A. | 0.733 |
I3KGS0_ORENI | hmg20b | ENSONIP00000020315 | ENSONIP00000006087 | REST corepressor 3. | High mobility group 20B. | 0.818 |
I3KGS0_ORENI | rest | ENSONIP00000020315 | ENSONIP00000001989 | REST corepressor 3. | RE1-silencing transcription factor. | 0.789 |
I3KHA1_ORENI | I3KGS0_ORENI | ENSONIP00000059266 | ENSONIP00000020315 | Amine oxidase. | REST corepressor 3. | 0.789 |
I3KHA1_ORENI | I3KPA0_ORENI | ENSONIP00000059266 | ENSONIP00000022945 | Amine oxidase. | PHD finger protein 21Ab. | 0.584 |
I3KHA1_ORENI | LOC100691799 | ENSONIP00000059266 | ENSONIP00000009730 | Amine oxidase. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.669 |
I3KHA1_ORENI | LOC100711924 | ENSONIP00000059266 | ENSONIP00000010308 | Amine oxidase. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.669 |
I3KPA0_ORENI | I3KGS0_ORENI | ENSONIP00000022945 | ENSONIP00000020315 | PHD finger protein 21Ab. | REST corepressor 3. | 0.815 |
I3KPA0_ORENI | I3KHA1_ORENI | ENSONIP00000022945 | ENSONIP00000059266 | PHD finger protein 21Ab. | Amine oxidase. | 0.584 |
I3KPA0_ORENI | KDM1B | ENSONIP00000022945 | ENSONIP00000017413 | PHD finger protein 21Ab. | Lysine demethylase 1B. | 0.653 |
I3KPA0_ORENI | Kdm1a | ENSONIP00000022945 | ENSONIP00000048588 | PHD finger protein 21Ab. | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | 0.966 |
I3KPA0_ORENI | LOC100691799 | ENSONIP00000022945 | ENSONIP00000009730 | PHD finger protein 21Ab. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.726 |
I3KPA0_ORENI | LOC100706625 | ENSONIP00000022945 | ENSONIP00000034791 | PHD finger protein 21Ab. | Amine oxidase. | 0.584 |
page 1 of 4