STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nhlrc2NHL repeat containing 2. (728 aa)    
Predicted Functional Partners:
tm2d2
TM2 domain containing 2.
      
 0.673
tm2d3
TM2 domain containing 3.
      
 0.663
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
     
 0.650
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.611
nprl2
NPR2 like, GATOR1 complex subunit.
    
 
 0.593
Tm2d1
TM2 domain-containing protein 1.
      
 0.576
ccdc186
Si:ch211-225b10.4.
   
  
 0.557
tradd
Tnfrsf1a-associated via death domain.
    
 0.556
cd247
T-cell surface glycoprotein CD3 zeta chain.
   
 0.531
LOC102081483
Ubiquitin-conjugating enzyme E2 variant 1.
    
 0.520
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.