STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100690003Low density lipoprotein receptor-related protein 2b. (4402 aa)    
Predicted Functional Partners:
boc
BOC cell adhesion associated, oncogene regulated.
     
 0.907
I3KZB7_ORENI
Growth arrest-specific 1a.
     
 0.907
I3J466_ORENI
Uncharacterized protein.
     
 0.905
ptch1
Patched 1.
     
 0.902
GAS1
Growth arrest-specific 1b.
     
 0.902
agrn
Agrin.
    
 0.827
shh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
     
 0.768
ldlrap1
Low density lipoprotein receptor adaptor protein 1b.
    
 0.757
dab2
DAB adaptor protein 2.
    
 0.732
pcsk9
Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family.
    
 0.709
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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