STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
astn1Astrotactin 1. (1318 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.759
lg16h2orf80
Uncharacterized protein C2orf80 homolog.
      
 0.588
I3K7Y9_ORENI
Cyclin-dependent kinase 5 activator.
   
  
 0.570
frk
Tyrosine-protein kinase.
   
 0.525
LOC100692890
RAN binding protein 2.
    
 0.521
kiaa1328
Zgc:162344.
   
    0.475
brinp1
Bone morphogenetic protein/retinoic acid inducible neural-specific 1.
   
  
 0.448
gad2
Glutamate decarboxylase 2.
   
 
 0.448
rbbp5
Retinoblastoma binding protein 5.
    
 0.445
Als2
Amyotrophic lateral sclerosis 2 protein.
    
 0.444
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.