STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hspbap1Hspb associated protein 1. (495 aa)    
Predicted Functional Partners:
riox1
Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase.
      
 0.721
hspb1
SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.680
kdm2a
Lysine (K)-specific demethylase 2Ab.
      
 0.638
KDM1B
Lysine demethylase 1B.
      
 0.605
jmjd4
Jumonji domain containing 4.
      
 0.588
LOC100695530
Lysine (K)-specific demethylase 5Bb.
      
 0.583
kdm4a
Lysine (K)-specific demethylase 4A, genome duplicate a.
      
 0.578
rbm46
RNA binding motif protein 46.
      
 0.572
ppp1r36
Protein phosphatase 1 regulatory subunit 36 isoform X1.
      
 0.572
LOC100699848
Lysine (K)-specific demethylase 6B, b.
      
 0.564
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.