STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nacaNascent polypeptide-associated complex subunit alpha; May promote appropriate targeting of ribosome-nascent polypeptide complexes. (1105 aa)    
Predicted Functional Partners:
rpl23a
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.982
rpl18
60S ribosomal protein L18; Component of the large ribosomal subunit.
   
 
 0.981
rpl24
Ribosomal protein L24.
   
   0.980
RPL7A
Ribosomal protein L7a.
   
 
 0.979
rpl9
Ribosomal protein L9.
   
   0.977
rpl18a
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 
 0.977
rpl6
Ribosomal protein L6.
   
   0.976
rpl4
Ribosomal protein L4.
   
 
 0.976
rpl30
Ribosomal protein L30.
   
 
 0.973
rpl17
Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.973
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.