STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100699182Glutamate receptor interacting protein 2a. (1084 aa)    
Predicted Functional Partners:
pick1
Protein interacting with prkca 1.
    
 0.756
Gria2
Glutamate receptor, ionotropic, AMPA 2b.
    
 0.650
glur2a
Uncharacterized protein.
    
 0.650
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.615
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
    
 0.609
ift172
Intraflagellar transport 172.
    
 0.604
I3J9T7_ORENI
TNF receptor-associated factor 3 interacting protein 1.
    
 0.604
grip1
Glutamate receptor interacting protein 1.
  
 
 
0.587
I3KF91_ORENI
Intraflagellar transport 88 homolog.
    
 0.576
ap2m1
AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...]
    
  0.555
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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