STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgef38Rho guanine nucleotide exchange factor (GEF) 38. (775 aa)    
Predicted Functional Partners:
LOC100707182
Bridging integrator 1a.
    
 
 0.685
I3KIT2_ORENI
Bridging integrator 2a.
    
 
 0.685
amph
Amphiphysin.
    
 
 0.685
ENSONIP00000063297
Bridging integrator 1b.
    
 
 0.685
cdc42
Cell division cycle 42.
    
 0.653
LOC100705444
Uncharacterized protein.
    
 0.585
LOC100705703
Uncharacterized protein.
    
 0.585
RAC2
Rac family small GTPase 2.
    
 0.585
I3KK64_ORENI
Uncharacterized protein.
    
 0.585
LOC100696401
Ras-related C3 botulinum toxin substrate 1-like.
    
 0.585
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.