STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrrtm2Leucine rich repeat transmembrane neuronal 2. (572 aa)    
Predicted Functional Partners:
nrxn1
Neurexin 1.
   
 0.704
I3JYF2_ORENI
Uncharacterized protein.
   
 0.704
LOC100697588
Neurexin 1.
   
 0.704
I3IXR1_ORENI
Neurexin 3b.
   
 0.704
LOC100710932
Uncharacterized protein.
   
 0.703
NRXN2
Neurexin 2.
   
 0.703
ENSONIP00000072833
annotation not available
   
 0.679
I3JQJ5_ORENI
Adhesion G protein-coupled receptor L3.1; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.575
ADGRL3
Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.575
LOC100702950
Si:ch1073-186i23.1; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.556
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.