STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NTN1Netrin 1. (606 aa)    
Predicted Functional Partners:
neo1
Neogenin 1b.
    
 0.789
Dcc
DCC netrin 1 receptor.
    
 0.789
LOC100705111
Immunoglobulin superfamily, DCC subclass, member 4.
    
 0.785
draxin
Draxin; Chemorepulsive axon guidance protein required for the development of spinal cord and forebrain commissures. Acts as a chemorepulsive guidance protein for commissural axons during development. Able to inhibit or repel neurite outgrowth from dorsal spinal cord; Belongs to the draxin family.
    
 
 0.652
LOC100690343
Uncharacterized protein.
    
 0.626
igdcc3
Immunoglobulin superfamily, DCC subclass, member 3.
    
 0.626
I3IYY9_ORENI
Uncharacterized protein.
    
 0.626
fndc1
Fibronectin type III domain containing 1.
    
 0.615
unc5b
Unc-5 netrin receptor B.
    
 0.589
LOC100712209
Down syndrome cell adhesion molecule a.
   
 0.582
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.