STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parp3Poly [ADP-ribose] polymerase. (539 aa)    
Predicted Functional Partners:
casp9
Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
    
 0.925
I3K3Z5_ORENI
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.925
LOC100705706
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.925
LOC100695417
Caspase 3; Belongs to the peptidase C14A family.
    
 0.925
ENSONIP00000063243
Caspase 3.
    
 0.925
casp7
Caspase 7, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
    
 0.925
I3JV59_ORENI
Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.
    
 0.925
APLF
Aprataxin and PNKP like factor.
    
 
 0.838
LOC100710690
Histone PARylation factor 1.
    
 
 0.788
LOC100701705
Poly (ADP-ribose) glycohydrolase, like.
    
 0.781
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.