STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100697477Neurexophilin; May be signaling molecules that resemble neuropeptides. (269 aa)    
Predicted Functional Partners:
LOC100711773
Bone morphogenetic protein/retinoic acid inducible neural-specific 3a, tandem duplicate 1.
  
  
 0.501
LOC100707385
Bone morphogenetic protein/retinoic acid inducible neural-specific 3b.
  
    0.499
LOC100711499
Bone morphogenetic protein/retinoic acid inducible neural-specific 3a, tandem duplicate 2.
  
  
 0.498
I3KUM8_ORENI
Protein S100; Belongs to the S-100 family.
  
     0.465
LOC100710932
Uncharacterized protein.
   
 
 0.454
nrxn1
Neurexin 1.
   
 
 0.454
I3JYF2_ORENI
Uncharacterized protein.
   
 
 0.454
LOC100697588
Neurexin 1.
   
 
 0.454
I3IXR1_ORENI
Neurexin 3b.
   
 
 0.454
ENSONIP00000072833
annotation not available
   
 
 0.454
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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