STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crbnCereblon. (458 aa)    
Predicted Functional Partners:
ddb1
Damage-specific DNA binding protein 1.
    
 
 0.987
cul4a
Cullin 4A; Belongs to the cullin family.
    
 
 0.921
csnk1a1
Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily.
    
 
 0.912
LOC102079525
ZFP91-CNTF readthrough (NMD candidate).
    
 
 0.911
LOC102081064
E3 ubiquitin-protein ligase ZFP91 isoform X1.
    
 
 0.911
Cul4b
Cullin-4B.
    
 
 0.907
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 
 0.905
ikzf1
IKAROS family zinc finger 1 (Ikaros).
    
 
 0.784
USP24
Ubiquitin specific peptidase 24; Belongs to the peptidase C19 family.
      
 0.768
rnf7
Ring finger protein 7.
    
 
 0.752
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.