STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100706112Metalloendopeptidase. (693 aa)    
Predicted Functional Partners:
blmh
Bleomycin hydrolase; Belongs to the peptidase C1 family.
      
 0.513
LOC100692870
Ammonium_transp domain-containing protein; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
   
  
 0.509
LOC100696603
Nuclear receptor subfamily 5, group A, member 5.
      
 0.494
LOC100698021
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
     
 0.488
LOC100707912
Peptidase S1 domain-containing protein.
     
 0.488
LOC100691639
Prostaglandin reductase 1.
      
 0.485
ifi30
Si:dkey-197i20.6.
      
 0.480
ufd1
Ubiquitin recognition factor in ER associated degradation 1.
      
 0.480
LOC100694460
IFI30 lysosomal thiol reductase.
      
 0.480
LOC100705023
Uncharacterized protein; Belongs to the peptidase S9B family.
      
 0.480
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.