STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
farp2FERM, RhoGEF and pleckstrin domain protein 2. (1057 aa)    
Predicted Functional Partners:
cdc42
Cell division cycle 42.
    
 0.943
SRC
Tyrosine-protein kinase.
    
  0.924
LOC100705444
Uncharacterized protein.
    
 0.924
LOC100705703
Uncharacterized protein.
    
 0.924
LOC100692677
Tyrosine-protein kinase.
    
  0.924
LOC100696557
Uncharacterized protein.
    
 0.924
LOC100712562
Uncharacterized protein.
    
 0.924
I3JIW9_ORENI
Uncharacterized protein.
    
 0.924
nrp1
Neuropilin; Belongs to the neuropilin family.
     
 0.547
Pip5k1c
Phosphatidylinositol-4-phosphate 5-kinase, type I, gamma a.
     
 0.534
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (26%) [HD]