STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ikbkeInhibitor of nuclear factor kappa B kinase subunit epsilon. (721 aa)    
Predicted Functional Partners:
LOC100704346
TRAF family member-associated NF-kappa-B activator isoform X2.
   
 0.995
sting1
Stimulator of interferon genes protein.
   
 0.995
LOC100702954
Interferon regulatory factor 3.
   
 0.990
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.981
irf7
Interferon regulatory factor 7.
   
 0.973
cyld
Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.
   
 0.959
ENSONIP00000057115
Ubiquitin carboxyl-terminal hydrolase CYLD.
   
 0.959
LOC100700811
Ubiquitin carboxyl-terminal hydrolase CYLD.
   
 0.959
LOC100693654
Uncharacterized protein.
   
 0.958
stat1
Signal transducer and activator of transcription.
   
 0.952
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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