STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ube2j2Ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast). (261 aa)    
Predicted Functional Partners:
LOC102081483
Ubiquitin-conjugating enzyme E2 variant 1.
   
 
 0.972
LOC100698164
NECAP endocytosis associated 1.
 
    
 0.894
ube2g2
Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.
    
0.888
necap2
NECAP endocytosis associated 2.
 
    
 0.840
atg7
ATG7 autophagy related 7 homolog (S. cerevisiae).
    
 0.829
Ube2w
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.797
Ube2s
Ubiquitin-conjugating enzyme E2S; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.781
ube2v2
Ubiquitin-conjugating enzyme E2 variant 2.
   
 
 0.764
ube2j1
Ubiquitin-conjugating enzyme E2, J1.
    
0.735
ube2z
Ubiquitin-conjugating enzyme E2Z.
   
0.733
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.