STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhpn1Rhophilin, Rho GTPase binding protein 1. (688 aa)    
Predicted Functional Partners:
chmp4b
Charged multivesicular body protein 4Bb.
   
 0.621
LOC100708589
Charged multivesicular body protein 4C.
   
 0.621
LOC100695572
Uncharacterized protein.
   
 0.621
ENSONIP00000071086
Charged multivesicular body protein 4b isoform X2.
   
 0.621
tm9sf1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 0.621
LOC100696066
UEV and lactate/malate dehyrogenase domains.
    
 0.529
rps27a
Ribosomal protein S27a.
   
 
 0.527
LOC100710999
Charged multivesicular body protein 5b.
    
 0.524
LOC100709386
Charged multivesicular body protein 5a.
    
 0.524
VPS4B
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
   
 0.523
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (28%) [HD]