STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100696311Bromodomain containing 2. (821 aa)    
Predicted Functional Partners:
taf7l
TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 
 0.636
LOC100700084
Ral guanine nucleotide dissociation stimulator-like 2.
      
 0.629
dmap1
DNA methyltransferase 1 associated protein 1.
    
 
 0.625
LOC100699818
PHD finger protein 1.
      
 0.607
I3KAI1_ORENI
Nuclear receptor binding SET domain protein 3.
   
 
 0.602
jmjd6
Jumonji domain containing 6, arginine demethylase and lysine hydroxylase.
    
 
 0.600
e2f1
E2F transcription factor 1.
    
 
 0.583
taf1
Transcription initiation factor TFIID subunit.
    
 
0.551
psmb8
Proteasome subunit beta.
    
 
 0.548
LOC100704063
Pre-B-cell leukemia homeobox 2.
   
  
 0.539
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.