STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cipcCLOCK-interacting pacemaker a. (356 aa)    
Predicted Functional Partners:
LOC100706575
Circadian associated repressor of transcription a.
   
  
 0.501
LOC100703460
Clock circadian regulator b.
      
 0.487
LOC100711101
F-box protein 32.
      
 0.483
LOC100691220
Neuronal PAS domain protein 2.
      
 0.480
pdk4
Protein-serine/threonine kinase.
      
 0.480
LOC100703716
Cryptochrome circadian regulator 1b.
      
 0.480
LOC100711812
Aryl hydrocarbon receptor nuclear translocator-like 2.
      
 0.477
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
      
 0.477
LOC100702127
Nuclear receptor subfamily 1, group D, member 2b.
      
 0.475
I3IYX1_ORENI
Arylalkylamine N-acetyltransferase 2.
      
 0.473
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.