STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lg18h7orf25Zgc:55781. (408 aa)    
Predicted Functional Partners:
psma2
Proteasome subunit alpha type.
 
    
 0.780
sec61g
SEC61 translocon gamma subunit.
      
 0.592
wdr83
WD repeat domain containing 83.
 
 
    0.590
nrbf2
Nuclear receptor binding factor 2b.
      
 0.584
dpcd
Deleted in primary ciliary dyskinesia homolog (mouse).
      
 0.584
vopp1
VOPP1 WW domain binding protein.
      
 0.581
blvra
Biliverdin reductase A.
      
 0.571
mrps24
Mitochondrial ribosomal protein S24.
      
 0.428
tmem165
GDT1 family protein.
      
 0.426
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.