STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnf152Ring finger protein 152. (165 aa)    
Predicted Functional Partners:
LOC100704732
Ras-related GTP binding A.
    
 0.742
rps27a
Ribosomal protein S27a.
    
  0.684
ENSONIP00000047919
Ubiquitin B.
    
  0.661
LOC100712348
Ubiquitin-conjugating enzyme E2Nb; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.601
LOC100699741
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.601
dnajc11
DnaJ (Hsp40) homolog, subfamily C, member 11a.
      
 0.589
klhl22
Kelch-like family member 22.
    
 
 0.580
LOC100697254
BCL2 interacting protein 1b.
      
 0.579
znrf1
Zinc and ring finger 1.
      
 0.578
fem1b
Fem-1 homolog b (C. elegans).
    
 0.575
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.