STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cebpgCCAAT enhancer binding protein gamma. (163 aa)    
Predicted Functional Partners:
atf4
Activating transcription factor 4a.
   
 0.913
LOC100706109
Activating transcription factor 4b.
   
 0.902
ddit3
Uncharacterized protein.
   
 0.706
COX2
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.
    
 0.663
LOC100693968
Activating transcription factor 5a.
   
 0.649
LOC100695966
Activating transcription factor 5b.
   
 0.649
atf3
Activating transcription factor 3.
   
 0.639
ENSONIP00000042411
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.597
COX5A
Cytochrome c oxidase subunit 5Ab.
   
 0.597
LOC100701956
Cytochrome c oxidase subunit 7C.
   
 0.582
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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