STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cited2Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4b. (255 aa)    
Predicted Functional Partners:
LOC100698988
E1A binding protein p300 a.
    
 0.821
LOC100700725
E1A binding protein p300 b.
    
 0.821
LOC100709989
CREB binding protein a.
    
 0.816
Crebbp
CREB binding protein b.
    
 0.816
tfap2d
Transcription factor AP-2 delta (activating enhancer binding protein 2 delta).
    
 0.622
cenpp
Centromere protein P.
    
 0.613
Ddx54
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily.
     
 0.533
eif4a3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
     
 0.526
tfap2b
Transcription factor AP-2 beta.
    
 0.512
tfap2e
Transcription factor AP-2 epsilon.
    
 0.512
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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