STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbccTubulin folding cofactor C. (347 aa)    
Predicted Functional Partners:
arl3
ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.
    
 0.851
LOC100701678
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.851
LOC100709097
ADP ribosylation factor like GTPase 3, like 2; Belongs to the small GTPase superfamily. Arf family.
    
 0.814
tbcd
Tubulin folding cofactor D.
    
 0.796
tbce
Tubulin folding cofactor E.
    
 0.791
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
      
 0.674
tbcb
Tubulin folding cofactor B.
      
 0.654
arl2
ADP-ribosylation factor-like 2; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.648
LOC100700719
GMP_PDE_delta domain-containing protein.
     
 0.647
unc119b
Unc-119 homolog 1.
     
 0.647
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.