STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrrc4Leucine rich repeat containing 4.2. (664 aa)    
Predicted Functional Partners:
LOC100692904
Netrin G2.
    
 0.944
LOC100694050
Leucine rich repeat containing 4.1.
  
 
 
0.904
rbm28
RNA binding motif protein 28.
      
 0.635
ntng1
Netrin g1a.
   
 0.600
LOC100691642
Vav 3 guanine nucleotide exchange factor b.
   
 0.600
tmem53
Transmembrane protein 53.
      
 0.573
I3JQJ5_ORENI
Adhesion G protein-coupled receptor L3.1; Belongs to the G-protein coupled receptor 2 family.
    
   0.530
LOC100702950
Si:ch1073-186i23.1; Belongs to the G-protein coupled receptor 2 family.
    
   0.530
I3KHL0_ORENI
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
   0.530
adgrl2
Adhesion G protein-coupled receptor L2a; Belongs to the G-protein coupled receptor 2 family.
    
   0.530
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.