STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100690744Nanos-type domain-containing protein; Belongs to the nanos family. (228 aa)    
Predicted Functional Partners:
pum1
Pumilio RNA-binding family member 1.
   
 
 0.952
Cnot1
CCR4-NOT transcription complex, subunit 1.
    
 
 0.928
edar
Ectodysplasin A receptor.
    
 0.688
I3JVP4_ORENI
Uncharacterized protein.
   
 
 0.630
piwil1
Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.
   
 
 0.617
piwil2
Piwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family.
   
 
 0.617
Dazl
Deleted in azoospermia-like.
    
 
 0.607
dnd1
DND microRNA-mediated repression inhibitor 1.
      
 0.594
tdrd7
Tudor domain containing 7 b.
   
  
 0.593
LOC100693948
DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast).
      
 0.576
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.