STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3KZ95_ORENIGlycoprotein IX (platelet). (229 aa)    
Predicted Functional Partners:
LOC102083190
Platelet glycoprotein Ib alpha chain.
   
 0.986
Gp1bb
Platelet glycoprotein Ib beta chain.
   
 0.979
vwf
Von Willebrand factor.
   
 0.961
I3KYC2_ORENI
LRRCT domain-containing protein.
   
 0.933
I3JGM9_ORENI
Si:ch211-237i5.4.
   
 0.890
LOC100702313
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
    
 0.698
LOC100702232
LRRCT domain-containing protein.
   
0.681
ENSONIP00000027310
annotation not available
   
0.681
ENSONIP00000049205
Uncharacterized protein LOC106097144.
   
0.681
I3IZU5_ORENI
Si:ch211-117l17.7.
   
 0.681
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.