STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100700968Noggin; Belongs to the noggin family. (211 aa)    
Predicted Functional Partners:
LOC100695597
Uncharacterized protein.
  
  
0.928
bmp4
Bone morphogenetic protein 4.
    
 0.925
bmp2
Bone morphogenetic protein 2b.
    
 0.818
bmp6
Bone morphogenetic protein 6.
    
 0.810
I3JF61_ORENI
Bone morphogenetic protein 16.
    
 0.809
LOC100694608
Anti-dorsalizing morphogenic protein.
    
 0.804
LOC100693128
TGF_BETA_2 domain-containing protein.
    
 0.804
bmp5
Bone morphogenetic protein 5.
    
 0.803
LOC100701625
Bone morphogenetic protein 7a.
    
 0.790
LOC100698527
Growth differentiation factor 7.
    
 0.788
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.