STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dcxDoublecortin. (360 aa)    
Predicted Functional Partners:
LOC100705410
Calcium/calmodulin-dependent protein kinase 1Db; Belongs to the protein kinase superfamily.
 
  
 
 0.872
Dclk3
Serine/threonine-protein kinase DCLK3 isoform X1.
 
  
 
 0.870
camk1d
Calcium/calmodulin-dependent protein kinase 1Da.
 
  
 
 0.841
Camk4
Si:ch73-60h1.1; Belongs to the protein kinase superfamily.
 
  
 
 0.833
pskh1
Protein serine kinase H1; Belongs to the protein kinase superfamily.
 
  
 
 0.810
LOC100694923
Si:ch211-27e6.1; Belongs to the protein kinase superfamily.
 
  
 
 0.760
ENSONIP00000041957
Nestin.
      
 0.683
bdnf
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
      
 0.672
phkg1
Phosphorylase kinase, gamma 1a (muscle).
 
      0.648
ENSONIP00000066161
annotation not available
 
  
 
 0.645
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.