STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100702995Neurogenin 1. (197 aa)    
Predicted Functional Partners:
LOC100703117
Myelin transcription factor 1.
   
  
 0.523
LOC100694572
Myelin transcription factor 1a.
   
  
 0.523
LOC100710315
Insulinoma-associated 1b.
   
 0.496
insm1
Insulinoma-associated 1a.
   
 0.496
INSM2
INSM transcriptional repressor 2.
   
 0.496
hes1
Hairy-related 6.
   
 0.492
ENSONIP00000043346
Wingless-type MMTV integration site family, member 8.
   
  
 0.492
ascl1
Achaete-scute family bHLH transcription factor 1a.
   
 
 0.490
LOC100701826
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.480
bmp2
Bone morphogenetic protein 2b.
      
 0.472
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.