STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100692561CDGSH iron-sulfur domain-containing protein 3, mitochondrial. (132 aa)    
Predicted Functional Partners:
mrpl15
Mitochondrial ribosomal protein L15.
   
 
 0.679
mrpl17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.643
mrpl24
Mitochondrial ribosomal protein L24.
   
   0.639
mrpl13
39S ribosomal protein L13, mitochondrial.
   
   0.638
mrps16
Mitochondrial ribosomal protein S16.
   
   0.636
RPL27A
Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
   
 
 0.630
mrpl47
Mitochondrial ribosomal protein L47.
   
   0.627
MRPL21
Mitochondrial ribosomal protein L21.
   
   0.626
mrps15
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.593
mrpl20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
   
   0.588
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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