STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102080439Uncharacterized LOC102080439. (173 aa)    
Predicted Functional Partners:
I3KX32_ORENI
Ig-like domain-containing protein.
   
  
 0.594
I3JW33_ORENI
Galactosylceramidase b.
    
 
 0.568
GALC
Glyco_hydro_59M domain-containing protein.
    
 
 0.568
tmem130
Transmembrane protein 130.
   
 0.553
gba
Glucosylceramidase.
   
 0.553
LOC102079789
Fibronectin type-III domain-containing protein.
   
  
 0.543
LOC100705827
Fas ligand (TNF superfamily, member 6); Belongs to the tumor necrosis factor family.
   
  
 0.524
fgfbp2
Fibroblast growth factor-binding protein 2.
   
  
 0.485
LOC100709183
Uncharacterized protein.
      
 0.456
nmu
Neuromedin U.
     
 0.411
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.