STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gmppbGDP-mannose pyrophosphorylase B. (360 aa)    
Predicted Functional Partners:
gmppa
GDP-mannose pyrophosphorylase Ab.
  
0.998
LOC100707130
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
  
 
 0.987
pmm1
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
  
 
 0.987
gmds
GDP-mannose 4,6-dehydratase.
    
 0.986
Alg1
ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase.
  
 0.958
eif2s1
Eukaryotic translation initiation factor 2, subunit 1 alpha b.
   
 0.920
eif2s2
Eukaryotic translation initiation factor 2, subunit 2 beta.
   
 0.919
Dpm2
Dolichol phosphate-mannose biosynthesis regulatory protein.
   
 
 0.916
dpm3
Dolichol-phosphate mannosyltransferase subunit 3; Stabilizer subunit of the dolichol-phosphate mannose (DPM) synthase complex; tethers catalytic subunit to the ER. Belongs to the DPM3 family.
     
 0.913
tgds
NAD(P)-bd_dom domain-containing protein.
  
 
 0.907
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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