STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdxpPyridoxal (pyridoxine, vitamin B6) phosphatase; Belongs to the HAD-like hydrolase superfamily. (314 aa)    
Predicted Functional Partners:
pnpo
Pyridoxamine 5'-phosphate oxidase.
   
 
 0.940
LOC100693660
Pyridoxal (pyridoxine, vitamin B6) kinase b.
    
 0.930
LOC100702179
Pyridoxal (pyridoxine, vitamin B6) kinase a.
    
 0.930
aox1
Aldehyde oxidase 6.
     
 0.905
LOC100704477
Phosphatase, orphan 2.
     
  0.900
nudt8
Nudix (nucleoside diphosphate linked moiety X)-type motif 8.
  
  
 0.598
xylb
Xylulokinase homolog (H. influenzae).
  
  
 0.527
h6pd
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
  
 
 0.522
LOC100690985
Family with sequence similarity 174 member B.
      
 0.493
pgls
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
  
 
 0.492
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.