STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100710036Uncharacterized protein LOC100710036 isoform X1. (360 aa)    
Predicted Functional Partners:
nuf2
UF2 component of NDC80 kinetochore complex.
   
 
 0.927
Spc25
SPC25 component of NDC80 kinetochore complex.
   
 
 0.919
Ndc80
NDC80 kinetochore complex component.
   
 
 0.909
spc24
SPC24 component of NDC80 kinetochore complex.
   
 
 0.903
mis12
MIS12 kinetochore complex component.
    
 
 0.892
bub1b
BUB1 mitotic checkpoint serine/threonine kinase Bb.
   
 0.851
bub1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.851
LOC100693963
Si:dkey-6i22.5.
    
 
 0.818
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.761
zw10
Zw10 kinetochore protein.
    
 
 0.749
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.