STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100703257Filamin C, gamma a (actin binding protein 280). (2740 aa)    
Predicted Functional Partners:
map2k4
Mitogen-activated protein kinase kinase 4; Belongs to the protein kinase superfamily.
    
 0.910
LOC100699105
Integrin beta; Belongs to the integrin beta chain family.
   
 0.879
Itgb8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.878
LOC100692535
Integrin beta; Belongs to the integrin beta chain family.
    
 0.872
Itgb5
Integrin beta; Belongs to the integrin beta chain family.
   
 0.859
itgb3
Integrin beta; Belongs to the integrin beta chain family.
   
 0.858
itgb1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.849
fblim1
Filamin binding LIM protein 1.
   
 0.803
LOC100696606
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
   
 0.732
LOC100704409
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
   
 0.732
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.