STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RGS22Uncharacterized protein. (1198 aa)    
Predicted Functional Partners:
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
   
 0.758
sigmar1
Sigma non-opioid intracellular receptor 1.
   
 0.722
ENSONIP00000071939
Cytidine deaminase.
   
  
 0.696
LOC100690152
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 
 0.664
ERG28
Ergosterol biosynthesis 28 homolog.
    
 
 0.654
LOC100711605
Malate synthase-like.
   
  
 0.649
trmt112
tRNA methyltransferase subunit 11-2.
   
 0.643
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.614
LOC100706770
Regulator of G protein signaling 2.
      
 0.614
eif2s3
Eukaryotic translation initiation factor 2, subunit 3 gamma.
   
 0.592
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.