STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100700369Ankyrin repeat domain 39. (183 aa)    
Predicted Functional Partners:
ENSONIP00000061701
Ankyrin repeat and SOCS box protein 5 isoform X2.
  
     0.524
bcl3
B-cell CLL/lymphoma protein 3.
  
     0.519
asz1
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
  
     0.511
ankrd10
Ankyrin repeat domain 10b.
  
     0.509
LOC100698616
Ankyrin repeat domain 10a.
  
     0.503
ift81
Intraflagellar transport 81 homolog.
    
 0.500
nfkbia
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.
  
     0.497
LOC100696320
Ankyrin repeat and SOCS box-containing 12a.
  
     0.494
asb1
Ankyrin repeat and SOCS box containing 1.
  
     0.488
LOC100691708
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.
  
     0.476
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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