STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttc4Tetratricopeptide repeat domain 4. (394 aa)    
Predicted Functional Partners:
hgh1
HGH1 homolog (S. cerevisiae).
   
 
 0.989
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.839
ppid
Peptidylprolyl isomerase D.
  
 
 0.752
nktr
Natural killer cell triggering receptor.
  
 
 0.752
ttc26
Tetratricopeptide repeat domain 26.
   
 0.747
trap1
TNF receptor-associated protein 1.
   
 0.731
ENSONIP00000000885
TSC complex subunit 1a.
   
 0.720
Hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
   
 0.720
LOC100704495
TSC complex subunit 1b.
   
 0.720
LOC100701982
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
   
 0.720
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.